DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and dimm

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster


Alignment Length:274 Identity:72/274 - (26%)
Similarity:106/274 - (38%) Gaps:67/274 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 QLQQQQPHQQSHAQMHFQNAY-RQSFEG--------YEPANSLNGSAY------SSSDRDDMEYA 299
            |||.|..|..::......|.. .:|.||        ....:.|:.:.|      |||..||....
  Fly    17 QLQHQLHHNNNNYNTDGHNGLSSESAEGSSRPVRRATRRTSQLSNNTYDLEMTDSSSQSDDTSGG 81

  Fly   300 RHNALSSVSDLNGGVMSPACLADDGSAG--------------------SLLDGSDAGGKAFRKPR 344
            ..::....|..|.|..|...|...|.:|                    :..:.|:|.|.|.|:.:
  Fly    82 GGSSNGGGSTTNTGHPSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRK 146

  Fly   345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATR 408
            ..|..|        |.:.:|:.:|.|||.|..||||||:||:::||.:..: :||||:||.||..
  Fly   147 GALNAK--------ERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKN 203

  Fly   409 YIDFLCRMLSSSDISLLKALE----------------AQGSPSAYGSASSLLSAA-------ANG 450
            ||..|..::.|.......|||                ..|.|.|.|..::..:|.       |:|
  Fly   204 YIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPANSNAATICFEDTLASG 268

  Fly   451 AEADLKCLRKANGA 464
            ...|...|...:|:
  Fly   269 GAFDCAILAATDGS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 28/58 (48%)
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 28/58 (48%)

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