DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and olig2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:200 Identity:56/200 - (28%)
Similarity:88/200 - (44%) Gaps:32/200 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 SSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRK----PRRRLKR 349
            ||.:.||:      .||:|....|  .|.|..:....:...|.|:|..|.:..:    ..:.|.:
Zfish    13 SSPEGDDL------FLSAVKKSVG--FSGAVSSTQSDSPPELRGADMRGISSAEEDSMALKMLSK 69

  Fly   350 KPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL--PS-DKLSKIQTLKLATRYID 411
            |..|....:|..:.|:..|.|||:|...||.|...|::::|..  || .|||||.||.||..|| 
Zfish    70 KDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYI- 133

  Fly   412 FLCRMLSSSDISLLKALEAQ----GS--------PSAYGSASSLLSAAANGAEADLKCLRKANGA 464
                ::.|:.:..:|.|.::    ||        ||:.|:.:...:|...|..|.:.........
Zfish   134 ----LMLSNSLEEMKRLVSEIYGGGSGAHHAGFHPSSCGTLTHAAAAPLPGHPAAVSHSSHPVHH 194

  Fly   465 PIIPP 469
            |::||
Zfish   195 PLLPP 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 25/60 (42%)
olig2NP_835201.1 bHLH_TS_OLIG2 69..151 CDD:381510 30/86 (35%)

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