DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Tal1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_063143802.1 Gene:Tal1 / 313507 RGDID:1306748 Length:335 Species:Rattus norvegicus


Alignment Length:243 Identity:70/243 - (28%)
Similarity:101/243 - (41%) Gaps:63/243 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 QSFEGYEPANSLNGSAYSSSDRDDM-EYARHNA-----------------LSSVSDLNGG----- 313
            :|..|..||.. .|:|.....||.: ..|||..                 .|:.::|.|.     
  Rat    63 RSSAGGGPAGG-GGAARDLKGRDAVATEARHRVPTTELCRPPGPAPAPAPASAPAELPGDGRMVQ 126

  Fly   314 VMSPACLADDGSAGSLLDG-----SDAGGKAFRKP--------RRRLKRKPS--KTEETDEFSN- 362
            :..||..|..|...:||..     :..|...|.:|        ..|:||:||  :.|.||.... 
  Rat   127 LSPPALAAPAGPGRALLYSLSQPLASLGSGFFGEPDAFPMFTNNNRVKRRPSPYEMEITDGPHTK 191

  Fly   363 --QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISL 424
              :|:..|.|||.|.|::|.||..|:::|||.|.| ||||.:.|:||.:||:||.::|:..    
  Rat   192 VVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQ---- 252

  Fly   425 LKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKL 472
                |.:|:..|......::.|...||...            ||||.|
  Rat   253 ----EEEGTQRAKPGKDPMVGAGGGGAGGG------------IPPEDL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 28/58 (48%)
Tal1XP_063143802.1 None

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