Protein Alignment twi and Msc

DIOPT Version :10

• Sequence 1: NP_523816.2
• Gene: twi / 37655
• FlyBaseID: FBgn0003900
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: XP_038965669.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 134
• Identity: 46/134 - (34%)
• Similarity: 66/134 - (49%)
• Gaps: 15/134 - (11%)

  Fly   293 RDDMEYARHNALSSVSDLN-GGVMSPACLADDGSAGSL-------LDGSDAGGKAFRKPRRRLKR 349
            |.:..||..:..||..:.: .|...|..:   |:||..       .|.|.|||.|....::.|
  Rat    33 RPERSYASPSDNSSAEEEDPDGEEEPGTV---GAAGGCKRKRPRGADASGAGGGAGSTGKKAL-- 92

  Fly   350 KPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFL 413
             |.|....:...:||..||.|||.|.:.|:.||..|:..:|.:|.| ||||:.||:||:.||..|
  Rat    93 -PPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHL 156

  Fly   414 CRML 417
            .::|
  Rat   157 RQLL 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
twi	NP_523816.2	bHLH_TS_TWIST	363..421	CDD:381470	27/56 (48%)
Msc	XP_038965669.1	bHLH_TS_musculin	102..167	CDD:381546	27/59 (46%)