Protein Alignment twi and l(1)sc

DIOPT Version :10

• Sequence 1: NP_523816.2
• Gene: twi / 37655
• FlyBaseID: FBgn0003900
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Alignment Length: 283
• Identity: 60/283 - (21%)
• Similarity: 89/283 - (31%)
• Gaps: 130/283 - (45%)

  Fly   213 STCTS--PQSHFDFPDEE--LPEHKAQVFLPLYNNQQQQSQ-----------QLQQQQPHQQSHA 262
            |.|:|  .|.|:...:..  |.:|:       :::|.||.|           |||..|..|||:.
  Fly     3 SICSSKFQQQHYQLTNSNIFLLQHQ-------HHHQTQQHQLIAPKIPLGTSQLQNMQQSQQSNV 60

  Fly   263 QMHFQNAYRQSFEGYEPANSLNGSAYSSSDR----DDMEYARHNALSSVSDLNGGVMSPACLADD 323
                                  |...||..:    ::|.|...  |.||:
  Fly    61 ----------------------GPMLSSQKKKFNYNNMPYGEQ--LPSVA--------------- 86

  Fly   324 GSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQI 388
                                 ||                     |.|||.|.:.:|:.|.:|:|.
  Fly    87 ---------------------RR---------------------NARERNRVKQVNNGFVNLRQH 109

  Fly   389 IPTL-----------PSDKLSKIQTLKLATRYIDFLCRMLSSSDISLLK-----ALEAQGSPSAY 437
            :|..           .|.||||:.||::|..||..|..||.....|..:     |.|:....|:|
  Fly   110 LPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESSNDGSSY 174

  Fly   438 G-------SASSLLSAAANGAEA 453
            .       |:...|:.|...|::
  Fly   175 NDYNDSLDSSQQFLTGATQSAQS 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
twi	NP_523816.2	bHLH_TS_TWIST	363..421	CDD:381470	23/68 (34%)
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	17/54 (31%)