DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and ac

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster


Alignment Length:139 Identity:37/139 - (26%)
Similarity:52/139 - (37%) Gaps:44/139 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 EETDEFSNQRVM-ANVRERQRTQSLNDAFKSLQQIIPTL---------------PSDKLSKIQTL 403
            |.:..|:...|: .|.|||.|.:.:|:.|..|:|.||..               .:.||||:.||
  Fly    16 ESSSAFNGPSVIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTL 80

  Fly   404 KLATRYIDFLCRMLSSSDISLLKALEAQ----------------------------GSPSAYGSA 440
            |:|..||..|.::|..:|....|.|..|                            ||.|:..|.
  Fly    81 KMAVEYIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSCNSI 145

  Fly   441 SSLLSAAAN 449
            ||....|.:
  Fly   146 SSYCKPATS 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 24/73 (33%)
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 23/68 (34%)

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