DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Lyl1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001007678.1 Gene:Lyl1 / 304663 RGDID:1359244 Length:278 Species:Rattus norvegicus


Alignment Length:138 Identity:52/138 - (37%)
Similarity:70/138 - (50%) Gaps:21/138 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 PRRRLKRKPSKTE------ETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKI 400
            |..||||:||..|      ...:...:||..|.|||.|.|.:|.||..|::::||.|.| ||||.
  Rat   124 PNSRLKRRPSHGELDLVDGHQPQKVARRVFTNSRERWRQQHVNGAFAELRKLLPTHPPDRKLSKN 188

  Fly   401 QTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKC-----LRK 460
            :.|:||.:||.||.|:|...     .|:.|.| |||.||..   ..|..|.|.:.:|     :..
  Rat   189 EVLRLAMKYIGFLVRLLRDQ-----AAVLASG-PSAPGSRK---PPAHRGVEGNARCGAGHRVEA 244

  Fly   461 ANGAPIIP 468
            |...|::|
  Rat   245 ARSQPVLP 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 29/58 (50%)
Lyl1NP_001007678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
bHLH_TS_LYL1 145..209 CDD:381548 29/68 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..278 14/44 (32%)
Blue background indicates that the domain is not in the aligned region.

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