DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and twist2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001005956.1 Gene:twist2 / 30395 ZFINID:ZDB-GENE-980526-235 Length:163 Species:Danio rerio


Alignment Length:213 Identity:80/213 - (37%)
Similarity:102/213 - (47%) Gaps:64/213 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 PANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKP 343
            |.:||..|. ...||....:.|.......|            ::|.|:.|.::            
Zfish    11 PVDSLVTSE-EELDRQQKRFGRKRRQGRKS------------SEDSSSPSSVN------------ 50

  Fly   344 RRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSKIQTLKLATR 408
            :|..|..||.|:..:|..||||:|||||||||||||:||.||::|||||||||||||||||||:|
Zfish    51 KRNKKPSPSSTQSFEELQNQRVLANVRERQRTQSLNEAFASLRKIIPTLPSDKLSKIQTLKLASR 115

  Fly   409 YIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKLS 473
            ||||||::|.|.::.                                   .|.:....:..|:||
Zfish   116 YIDFLCQVLQSDEMD-----------------------------------NKMSSCSYVAHERLS 145

  Fly   474 YLFGVWRMEG----DAQH 487
            |.|.||||||    .|.|
Zfish   146 YAFSVWRMEGAWSMSASH 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 48/57 (84%)
twist2NP_001005956.1 bHLH_TS_TWIST1 59..135 CDD:381418 53/110 (48%)

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