DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and twist2

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001005956.1 Gene:twist2 / 30395 ZFINID:ZDB-GENE-980526-235 Length:163 Species:Danio rerio


Alignment Length:213 Identity:80/213 - (37%)
Similarity:102/213 - (47%) Gaps:64/213 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 PANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKP 343
            |.:||..|. ...||....:.|.......|            ::|.|:.|.::            
Zfish    11 PVDSLVTSE-EELDRQQKRFGRKRRQGRKS------------SEDSSSPSSVN------------ 50

  Fly   344 RRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSKIQTLKLATR 408
            :|..|..||.|:..:|..||||:|||||||||||||:||.||::|||||||||||||||||||:|
Zfish    51 KRNKKPSPSSTQSFEELQNQRVLANVRERQRTQSLNEAFASLRKIIPTLPSDKLSKIQTLKLASR 115

  Fly   409 YIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKLS 473
            ||||||::|.|.::.                                   .|.:....:..|:||
Zfish   116 YIDFLCQVLQSDEMD-----------------------------------NKMSSCSYVAHERLS 145

  Fly   474 YLFGVWRMEG----DAQH 487
            |.|.||||||    .|.|
Zfish   146 YAFSVWRMEGAWSMSASH 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 43/49 (88%)
twist2NP_001005956.1 HLH 70..120 CDD:278439 43/49 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583751
Domainoid 1 1.000 91 1.000 Domainoid score I7661
eggNOG 1 0.900 - - E1_KOG4447
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001055
OrthoInspector 1 1.000 - - otm25873
orthoMCL 1 0.900 - - OOG6_107717
Panther 1 1.100 - - LDO PTHR23349
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5507
SonicParanoid 1 1.000 - - X1477
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.770

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