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Protein Alignment twi and twist3
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571060.2 |
Gene: | twist3 / 30176 |
ZFINID: | ZDB-GENE-000210-7 |
Length: | 199 |
Species: | Danio rerio |
Alignment Length: | 160 |
Identity: | 67/160 - (41%) |
Similarity: | 81/160 - (50%) |
Gaps: | 54/160 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 343 PRRRLKRKPSKTEET-------------------DEFSNQRVMANVRERQRTQSLNDAFKSLQQI 388
|:|..:..||.:..: ::...|||:||||||||||||||||.||::|
Zfish 67 PKRPKRSSPSSSSSSSSSLVPVVSSVSPVPGQPFEDLHTQRVIANVRERQRTQSLNDAFASLRKI 131
Fly 389 IPTLPSDKLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEA 453
|||||||||||||.||||:||||||.::|.|. |.
Zfish 132 IPTLPSDKLSKIQILKLASRYIDFLYQVLQSD-------------------------------EM 165
Fly 454 DLKCLRKANGAPIIPPEKLSYLFGVWRMEG 483
|.| |...| .:..|:|||.|.||||||
Zfish 166 DAK-LASCN---YLAHERLSYAFSVWRMEG 191
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
43/49 (88%) |
twist3 | NP_571060.2 |
HLH |
106..156 |
CDD:278439 |
43/49 (88%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170583773 |
Domainoid |
1 |
1.000 |
91 |
1.000 |
Domainoid score |
I7661 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4447 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H101975 |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001055 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm25873 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23349 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R5507 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1477 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
10 | 9.870 |
|
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