DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and twist1a

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_571059.1 Gene:twist1a / 30175 ZFINID:ZDB-GENE-000210-6 Length:171 Species:Danio rerio


Alignment Length:220 Identity:80/220 - (36%)
Similarity:103/220 - (46%) Gaps:63/220 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 MHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGS 328
            ||..::..:|     |.:||..|......|.....:|....|..:            |:|..   
Zfish     7 MHEDSSSPES-----PVDSLGNSEEELDRRQPKRVSRKKRASRKN------------AEDSD--- 51

  Fly   329 LLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLP 393
                |...||..:|    .....|..:..::...|||||||||||||||||:||.||::||||||
Zfish    52 ----SPTPGKRSKK----CSNSSSSPQSLEDLQTQRVMANVRERQRTQSLNEAFASLRKIIPTLP 108

  Fly   394 SDKLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCL 458
            |||||||||||||.|||||||::|.|.:      |:::.|..:|                     
Zfish   109 SDKLSKIQTLKLAARYIDFLCQVLQSDE------LDSKMSSCSY--------------------- 146

  Fly   459 RKANGAPIIPPEKLSYLFGVWRMEG 483
                    :..|:|||.|.||||||
Zfish   147 --------VAHERLSYAFSVWRMEG 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 49/57 (86%)
twist1aNP_571059.1 bHLH_SF 73..143 CDD:469605 50/75 (67%)

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