DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Nhlh2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001099927.1 Gene:Nhlh2 / 295327 RGDID:1308294 Length:135 Species:Rattus norvegicus


Alignment Length:129 Identity:45/129 - (34%)
Similarity:62/129 - (48%) Gaps:16/129 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 SDRDDMEYARHNALSSVSDLNGGVMSPACLAD-DGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKT 354
            ||.:.:.......|.|||||     .|....| ||..||.........:..|:.:||.:|..:| 
  Rat    19 SDPESLGGVDTKVLGSVSDL-----EPVEEVDGDGKGGSRAALYPHPQQLSREEKRRRRRATAK- 77

  Fly   355 EETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRML 417
                    .|.....|||.|.::.|.||..|::::||||.| |||||:.|:||..||.:|..:|
  Rat    78 --------YRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/56 (46%)
Nhlh2NP_001099927.1 bHLH_TS_HEN2 63..135 CDD:381545 31/80 (39%)

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