DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Figla

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_036143.1 Gene:Figla / 26910 MGIID:1349421 Length:194 Species:Mus musculus


Alignment Length:165 Identity:49/165 - (29%)
Similarity:72/165 - (43%) Gaps:43/165 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 RLKRKP----SKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLP-SDKLSKIQTLKL 405
            ||||.|    |.|::......:|.:||.:||:|.::||..|..|:.::|.|| |.|.||:..||.
Mouse    39 RLKRLPSGGYSTTDDLHLVLERRRVANAKERERIKNLNRGFAKLKALVPFLPQSRKPSKVDILKG 103

  Fly   406 ATRYIDFLCRMLSSSDISLLKALEAQ---GSPS---------AYGSASSLLSAAANGAEADLKCL 458
            ||.||..|..:|..:.:|..::.|.|   |.||         ..|:|:...|.|:.        |
Mouse   104 ATEYIQILGCVLEEAKVSEKQSPEEQTHSGRPSDPHVSSTRELLGNATQPTSCASG--------L 160

  Fly   459 RKANGAPIIPPEKLSYLFGVWRMEGDAQ-----HQ 488
            :|....|             |...|.::     ||
Mouse   161 KKEEEGP-------------WAYAGHSEPLYSYHQ 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 23/50 (46%)
FiglaNP_036143.1 HLH 59..116 CDD:238036 24/56 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..163 11/49 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839687
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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