DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and PTF1A

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_835455.1 Gene:PTF1A / 256297 HGNCID:23734 Length:328 Species:Homo sapiens


Alignment Length:239 Identity:72/239 - (30%)
Similarity:103/239 - (43%) Gaps:62/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 PQSHFD----FPDEELPEHKAQVFLPLYNNQQQQSQQLQQQQPHQQSHAQMHFQNAYRQS----F 274
            |.|:||    |.|:...:       ||.:..:..:.  :|.:....|| |:| :..||..    .
Human    17 PSSYFDEDDFFTDQSSRD-------PLEDGDELLAD--EQAEVEFLSH-QLH-EYCYRDGACLLL 70

  Fly   275 EGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGG-----------------VMSPACLAD 322
            :...||..|..:..||           ..|....|..||                 ...|:|||.
Human    71 QPAPPAAPLALAPPSS-----------GGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPSCLAY 124

  Fly   323 D--GSA----GSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDA 381
            .  |:|    |:.|.|......|..:.|||::.:.       |....|..||||||:|.||:|||
Human   125 PCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEA-------ELQQLRQAANVRERRRMQSINDA 182

  Fly   382 FKSLQQIIPTLPSDK-LSKIQTLKLATRYIDFLCRMLSSSDISL 424
            |:.|:..|||||.:| |||:.||:||..||:||..:: .:|:.|
Human   183 FEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV-QADLPL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 32/58 (55%)
PTF1ANP_835455.1 bHLH_TS_PTF1A 165..219 CDD:381423 32/53 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..278
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.

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