DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Ascl2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:262 Identity:63/262 - (24%)
Similarity:98/262 - (37%) Gaps:72/262 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 SAQSCPGVQSTCTSPQSHFDFPDEELPEHK--AQVFLPLYNNQQQQSQQLQQQQPHQQSHAQMHF 266
            ::.:||  :.:|:|          .|||.:  |.|..|                ||..  .:.||
  Rat    16 ASDACP--RESCSS----------ALPEAREGANVHFP----------------PHPV--PREHF 50

  Fly   267 QNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLD 331
            .....:...|   |.:||.|.                      ::||.:........|.||:.  
  Rat    51 SCGAPKPVAG---APALNASL----------------------MDGGALPRLVPTSSGVAGAC-- 88

  Fly   332 GSDAGGKAFRKP-----RRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPT 391
                  .|.|:|     .|..:|:.|...|....|......|.|||.|.:.:|..|::|:|.:|.
  Rat    89 ------TARRRPPSPELLRCSRRRRSGATEASSSSAAVARRNERERNRVKLVNLGFQALRQHVPH 147

  Fly   392 LPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADL 455
            ..:: ||||::||:.|..||..|.|:|:..| ::..||.......|...:......:|:.|.|.|
  Rat   148 GGANKKLSKVETLRSAVEYIRALQRLLAEHD-AVRAALSGGLLTPATRPSDVCTQPSASPASASL 211

  Fly   456 KC 457
            .|
  Rat   212 SC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 22/58 (38%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 11/48 (23%)
bHLH_TS_ASCL2_Mash2 128..180 CDD:381586 20/52 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239 6/23 (26%)

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