DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and Ascl5

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001257538.1 Gene:Ascl5 / 226439 MGIID:2685043 Length:188 Species:Mus musculus


Alignment Length:98 Identity:30/98 - (30%)
Similarity:49/98 - (50%) Gaps:20/98 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 NVRERQRTQSLNDAFKSLQQIIP-TLPSDKLSKIQTLKLATRYIDFLCRMLSS------------ 419
            |.|||||.:.:|:.:..|:..:| .|...:|||::||:.|.|||.:|..:||:            
Mouse    86 NERERQRVKCVNEGYARLRGHLPGALTEKRLSKVETLRAAIRYIKYLQELLSATPDGAPPPATSP 150

  Fly   420 -------SDISLLKALEAQGSPSAYGSASSLLS 445
                   |::....:|.|:.|.|.:.|:..|.|
Mouse   151 PPAHTGHSNVPQPSSLVAESSGSPFSSSPFLES 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 22/72 (31%)
Ascl5NP_001257538.1 bHLH_TS_ASCL5 76..136 CDD:381590 20/49 (41%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 80..93 5/6 (83%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 94..132 13/37 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..188 8/45 (18%)

Return to query results.
Submit another query.