DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Tcf15

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_006499163.1 Gene:Tcf15 / 21407 MGIID:104664 Length:262 Species:Mus musculus


Alignment Length:236 Identity:72/236 - (30%)
Similarity:100/236 - (42%) Gaps:37/236 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 QNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSP--ACLADDGSAGSL 329
            |:..|:....:|.|.:..|...|.:.|.:.......|.:.:..:...|:.|  ..|::|....|.
Mouse    33 QSVRRRPAGPWERAGAHGGGGGSGTRRVEARGRAPMAFALLRPVGAHVLYPDVRLLSEDEENRSE 97

  Fly   330 LDGSD------AGGKAFRK-PRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQ 387
            .|.||      .|.:|.|: |.....|:.|..........||..||.|||.||||:|.||.:|:.
Mouse    98 SDASDQSFGCCEGLEAARRGPGPGSGRRASNGAGPVVVVRQRQAANARERDRTQSVNTAFTALRT 162

  Fly   388 IIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSP--SAYGSASSLLSAA-- 447
            :|||.|.| |||||:||:||:.||..|..:|      ||......|.|  .|.|...|.:.||  
Mouse   163 LIPTEPVDRKLSKIETLRLASSYIAHLANVL------LLGDAADDGQPCFRAAGGGKSAVPAADG 221

  Fly   448 ---------------ANGAEADL--KCLRKANGAPIIPPEK 471
                           ..|:..||  .||:....||:..|.:
Mouse   222 RQPRSICTFCLSNQRKGGSRRDLGGSCLKVRGVAPLRGPRR 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 31/50 (62%)
Tcf15XP_006499163.1 bHLH_TS_TCF15_paraxis 131..196 CDD:381476 34/70 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839689
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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