DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and hlh-10

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:194 Identity:46/194 - (23%)
Similarity:72/194 - (37%) Gaps:27/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 NNQQQQSQQLQQQQPHQQSHAQMHFQNAYRQS-FEGYEPANSLNGSAYSSSDRDDMEYARHNALS 305
            |::....||:.|.........|.:....:.|| .|.......|.......:|..:.:..:.|. |
 Worm    23 NSELSDEQQIMQVMESCGMFLQQNLFAWFLQSMLEASASQPQLTQDEPPENDTKENDLVKQNK-S 86

  Fly   306 SVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVR 370
            .|:|.|....||.                      :..|||............:...:|..||.|
 Worm    87 EVNDENESTPSPT----------------------QNSRRRTSTGKIDRRMVGKMCTRRYEANAR 129

  Fly   371 ERQRTQSLNDAFKSLQQIIPTLPSDKLSKIQTLKLATRYIDFLCRML---SSSDISLLKALEAQ 431
            ||.|.|.|:..|..|:..:|.....|:||:.|||:|:.||.:|..:|   |:.:....|.|:.:
 Worm   130 ERNRVQQLSKMFDQLRVCLPIEDDAKISKLATLKVASSYIGYLGAILQENSNDEEEFKKQLQVE 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 24/60 (40%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:469605 23/57 (40%)

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