DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and hnd-1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_509952.1 Gene:hnd-1 / 183457 WormBaseID:WBGene00001981 Length:226 Species:Caenorhabditis elegans


Alignment Length:74 Identity:29/74 - (39%)
Similarity:47/74 - (63%) Gaps:3/74 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 SKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDK---LSKIQTLKLATRYIDFL 413
            |..|.||...:::..:..:|.:|.|.:|.||:.|||.||.|.|::   |.||:||:||.:|||.|
 Worm    13 SSLESTDSKKSRKEKSREKEHRRAQCINSAFEILQQHIPYLKSEERKSLPKIKTLRLAMQYIDHL 77

  Fly   414 CRMLSSSDI 422
            .::|..:::
 Worm    78 KKLLGGNEM 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 25/60 (42%)
hnd-1NP_509952.1 bHLH_TS_ASCL 24..81 CDD:381424 24/56 (43%)

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