DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Neurod2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_035025.3 Gene:Neurod2 / 18013 MGIID:107755 Length:383 Species:Mus musculus


Alignment Length:270 Identity:64/270 - (23%)
Similarity:95/270 - (35%) Gaps:95/270 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 LNGGVMSP----ACLADDGSAGSL----------LDGSDAGGKAFRKPRRRLKRKPSKTEETDEF 360
            |.||...|    |.:.::|..|..          ||  :|.|:   :|::|..:|...|:...|.
Mouse    60 LRGGEEIPEPTLAEVKEEGELGGEEEEEEEEEEGLD--EAEGE---RPKKRGPKKRKMTKARLER 119

  Fly   361 SN-QRVMANVRERQRTQSLNDAFKSLQQIIPTL-PSDKLSKIQTLKLATRYI------------- 410
            |. :|..||.|||.|...||.|..:|::::|.. .:.|||||:||:||..||             
Mouse   120 SKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRP 184

  Fly   411 ------DFLCRMLSSSDISLLKA---------LEAQGSPSA------------------------ 436
                  ..||:.||....:|:..         |..||:..|                        
Mouse   185 DLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAG 249

  Fly   437 ---------------------YGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKLSYLFGVWR 480
                                 |.:|...|.|||.|..|...........|:.||..|:..|.: :
Mouse   250 AQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLSPPLCLNGNFSL-K 313

  Fly   481 MEGDAQHQKA 490
            .:....|:|:
Mouse   314 QDSSPDHEKS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 27/77 (35%)
Neurod2NP_035025.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..130 20/74 (27%)
bHLH_TS_NeuroD2 89..181 CDD:381563 33/96 (34%)
Nuclear localization signal. /evidence=ECO:0000255 108..114 1/5 (20%)
Neuro_bHLH 181..311 CDD:463621 21/129 (16%)

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