DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and ngn-1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_500236.1 Gene:ngn-1 / 177045 WormBaseID:WBGene00003595 Length:184 Species:Caenorhabditis elegans


Alignment Length:112 Identity:41/112 - (36%)
Similarity:59/112 - (52%) Gaps:7/112 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 KAFRKPRRRL---KRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLS 398
            |..::.:||.   ||.|:..|...  :.:|..||.|||:|..|||||.:.|:.|:|.||.: |::
 Worm    37 KPVKREKRRYRCRKRSPATIERAK--TVRRDKANARERRRMNSLNDALEHLRGILPALPDEPKMT 99

  Fly   399 KIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLS 445
            ||:||:.|..||..|...||.......:..|. ||.....::.||.|
 Worm   100 KIETLRKAQEYIASLSFQLSGGSPDSSQCCET-GSCGLCSASQSLQS 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 28/58 (48%)
ngn-1NP_500236.1 bHLH_SF 63..119 CDD:469605 26/55 (47%)

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