DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and hlh-4

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001379052.1 Gene:hlh-4 / 176372 WormBaseID:WBGene00001951 Length:205 Species:Caenorhabditis elegans


Alignment Length:56 Identity:22/56 - (39%)
Similarity:36/56 - (64%) Gaps:2/56 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 NVRERQRTQSLNDAFKSLQQIIPTLP--SDKLSKIQTLKLATRYIDFLCRMLSSSD 421
            |.|||.|..::|.||..|:|.:|:|.  :.::||::.|..|..|||.|.:::.||:
 Worm     9 NARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLRILNAAITYIDTLLKLIQSSE 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 21/54 (39%)
hlh-4NP_001379052.1 bHLH_TS_ASCL 5..60 CDD:381424 20/50 (40%)

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