DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Mesp2

DIOPT Version :9

Sequence 1:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_032615.2 Gene:Mesp2 / 17293 MGIID:1096325 Length:370 Species:Mus musculus


Alignment Length:188 Identity:54/188 - (28%)
Similarity:80/188 - (42%) Gaps:43/188 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 ADDGSAGSLLDGSDAGGK----AFRKPRRRLKRKPSKTEETDEFS-----------NQRVMANVR 370
            |....:.|....||:.|.    |.|:|.:  ...|:::..|.:.:           .||..|:.|
Mouse    25 AQQSDSTSPASSSDSSGSCPCYATRRPSQ--PAGPARSTRTTQATAPRRTRPAPAGGQRQSASER 87

  Fly   371 ERQRTQSLNDAFKSLQQIIPTLPS-----DKLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEA 430
            |:.|.::|..|.:.|::.:|  ||     ..|:||:||:||.|||..|..:|..|:.||.:....
Mouse    88 EKLRMRTLARALQELRRFLP--PSVAPAGQSLTKIETLRLAIRYIGHLSALLGLSEDSLRRRRRR 150

  Fly   431 Q---------------GSPS-AYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKL 472
            .               |||| |.....||.||.::|  ....|.....| |:|.||.|
Mouse   151 SADAAFSHRCPQCPDGGSPSQAQMLGPSLGSAMSSG--VSWGCPPACPG-PLISPENL 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_001033967.1 HLH 363..413 CDD:278439 22/54 (41%)
Mesp2NP_032615.2 HLH 80..133 CDD:278439 22/54 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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