DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twi and Oli

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_061515273.1 Gene:Oli / 1280184 VectorBaseID:AGAMI1_009714 Length:233 Species:Anopheles gambiae


Alignment Length:138 Identity:42/138 - (30%)
Similarity:57/138 - (41%) Gaps:42/138 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 RVMANVRERQRTQSLNDAFKSLQQIIPTLPSD---KLSKIQTLKLATRYI-------DFLCRMLS 418
            |:..|.|||:|...||||...|:.:||...|.   |||||.||.||..||       |.|.|:|:
Mosquito    99 RLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQANALDELRRLLA 163

  Fly   419 ---SSDISLLKALEAQGSPSAY-------------------GSASSLLSAAANGAEADLKCLRKA 461
               |:..:.:..::.:..|||.                   ||:|:..|..|.          :|
Mosquito   164 YIQSAAGASIPTVDLRTMPSALKLQQLLQAPHQDLALQQPSGSSSTTTSTQAG----------QA 218

  Fly   462 NGAPIIPP 469
            ...|..||
Mosquito   219 GALPPPPP 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 30/69 (43%)
OliXP_061515273.1 None

Return to query results.
Submit another query.