DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and HLH4C

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_061498807.1 Gene:HLH4C / 1275714 VectorBaseID:AGAMI1_002064 Length:142 Species:Anopheles gambiae


Alignment Length:112 Identity:38/112 - (33%)
Similarity:55/112 - (49%) Gaps:30/112 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 GSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSN---------------QRVMANVRERQ 373
            ||||.:              |:|.:::...:.:|.||||               .|.....|||.
Mosquito    45 GSAGPV--------------RQRKQQQDPSSIQTTEFSNLTREERRRRRRATLKYRTAHATRERI 95

  Fly   374 RTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSS 419
            |.::.|.||..|::::||||.| |||||:.||||..||.:|..:|.:
Mosquito    96 RVEAFNVAFSELRKLLPTLPPDKKLSKIEILKLAICYISYLNHVLDA 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 27/58 (47%)
HLH4CXP_061498807.1 None

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