DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Fer2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_061508640.1 Gene:Fer2 / 1271473 VectorBaseID:AGAMI1_010069 Length:264 Species:Anopheles gambiae


Alignment Length:234 Identity:65/234 - (27%)
Similarity:83/234 - (35%) Gaps:89/234 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 LNGSAYSSSDRDDME------YARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFR 341
            |:|..:.|.|.:.|.      ||:|:.|::... |||       |...|||.....|...|.|  
Mosquito    18 LSGIGFHSFDDELMADLPSCVYAQHHQLNAAPG-NGG-------AGSSSAGHSAGHSGHTGNA-- 72

  Fly   342 KPRRRL---------------------KRKPSKTEETDEFSN----------QRVMANVRERQR- 374
            .|..||                     ...||.:..|...::          ||...|||||:| 
Mosquito    73 PPNLRLNPTSIRQMQHQYLHHTECLDSSTPPSPSLSTTMGTHPYNPPPYNKMQRQQTNVRERKRM 137

  Fly   375 ----------TQSLNDAFKSLQQIIPTLPSDK-LSKIQTLKLATRYIDFLCRMLSSSDISLLKAL 428
                      ..|:|.||..|:..:||.|.:| ||||.||:||..||..           |.:.|
Mosquito   138 MRSAPNGSTINSSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYIAL-----------LREVL 191

  Fly   429 EAQGSPSAYGSASSLLSAAANGAEADLKCLR---KANGA 464
            ||...|..|..                ||||   ||:.|
Mosquito   192 EADYDPLTYVE----------------KCLRGEIKADRA 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 27/69 (39%)
Fer2XP_061508640.1 None

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