DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and Neurog3

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_033849.3 Gene:Neurog3 / 11925 MGIID:893591 Length:214 Species:Mus musculus


Alignment Length:207 Identity:60/207 - (28%)
Similarity:84/207 - (40%) Gaps:41/207 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 PHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACL 320
            ||......:......:|.|.|             :||        |..|||    |....||..:
Mouse     3 PHPLDALTIQVSPETQQPFPG-------------ASD--------HEVLSS----NSTPPSPTLI 42

  Fly   321 ADDGSAGSLLD--GSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFK 383
            ..|.|...:.|  |:....:|.|..|.|.|   |:...:.:..::|..||.|||.|..:||.|..
Mouse    43 PRDCSEAEVGDCRGTSRKLRARRGGRNRPK---SELALSKQRRSRRKKANDRERNRMHNLNSALD 104

  Fly   384 SLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLL----------KALEAQGSPSAY 437
            :|:.::||.|.| ||:||:||:.|..||..|.:.|..:|.|..          ......||...:
Mouse   105 ALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSFYGPEPPVPCGELGSPGGGSNGDW 169

  Fly   438 GSASSLLSAAAN 449
            ||..|.:|.|.|
Mouse   170 GSIYSPVSQAGN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 26/58 (45%)
Neurog3NP_033849.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..98 31/122 (25%)
bHLH_TS_NGN3_ATOH5 77..144 CDD:381561 26/66 (39%)

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