DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and neurog2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_002934289.2 Gene:neurog2 / 100493110 XenbaseID:XB-GENE-491040 Length:213 Species:Xenopus tropicalis


Alignment Length:212 Identity:64/212 - (30%)
Similarity:93/212 - (43%) Gaps:35/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 RDDMEYARHNALSSVSDLNGGVMSPA--CLADD----GSAGSLLDGSDAGGKAFRKPRRRLKRKP 351
            ||:.|.....:..|||..:   ||||  |.:||    ......|....|..:....|.|| .|..
 Frog     9 RDEEEELTSASPCSVSSSH---MSPAQTCSSDDEQLLSPTSPALMHLQAQEQENSPPSRR-SRPR 69

  Fly   352 SKTEET--DEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFL 413
            :|..||  .....:|:.||.|||.|...||.|..||::::|:||.| ||:||:||:.|..||..|
 Frog    70 TKNGETVLKVKKTRRIKANNRERNRMHHLNSALDSLREVLPSLPEDAKLTKIETLRFAYNYIWAL 134

  Fly   414 CRML-------SSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEK 471
            ...|       |:|.:|.:...::..|.|...|.||..|::.            .:.:|..|...
 Frog   135 SETLRLAEHGSSASTLSPMSVQDSSPSQSPSWSCSSSPSSSC------------GSFSPASPASS 187

  Fly   472 LSYLFGVWRMEGDAQHQ 488
            .|.:...|:   .|:|:
 Frog   188 TSDMLEYWQ---PAEHR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 28/65 (43%)
neurog2XP_002934289.2 bHLH_TS_NGN2_ATOH4 74..142 CDD:381560 29/67 (43%)

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