DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and lyl1

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_068077959.2 Gene:lyl1 / 100333113 ZFINID:ZDB-GENE-090807-1 Length:321 Species:Danio rerio


Alignment Length:342 Identity:88/342 - (25%)
Similarity:121/342 - (35%) Gaps:99/342 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 CQTGGSLVMQPEHKKLIHQQQQQQQQHQQQIYVDYLPTTVDEVASAQSCPGVQSTCTSPQSHFDF 224
            |.|      .|:|.:...|..|:.            ..|..|..|.:|.......||:..|....
Zfish    36 CST------PPDHAEPRAQDTQEP------------GATGAETDSRRSSSSRSPHCTTTDSRRGS 82

  Fly   225 PDEELPEHKAQVF----------LPLYNNQQQQSQQLQQQQPHQQSHAQMHFQNAYRQSFEGYEP 279
            ....||.|...:.          |||.       ..|....|.....|::..  |......|..|
Zfish    83 SSASLPAHIPVISLAHSKPPLPPLPLL-------AALHPAPPPPHGPAELRL--AQLSCLTGSSP 138

  Fly   280 ANSLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPR 344
            |.:|...|:..:         |..:||     ..:|.||......:|                  
Zfish   139 AAALLPPAFLQT---------HPFISS-----SFLMPPAGFGIFSNA------------------ 171

  Fly   345 RRLKRKPSKTEETDEFSN-------QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQ 401
             |:||:||...|.:..|:       :||..|.|||.|.|::|.||..|:::|||.|.| ||||.:
Zfish   172 -RMKRRPSTHFEVEIRSDGPPQKLARRVFTNSRERWRQQNVNGAFSELRKLIPTHPPDRKLSKNE 235

  Fly   402 TLKLATRYIDFLCRMLSS----------------SDISLLKALEAQGSPSAYGSASSLLSAAANG 450
            .|:||.:|||||.::|:.                |..|||....:.|| |.||...|..|.....
Zfish   236 ILRLAMKYIDFLEQLLNDQSQPEETGQHAHAHTPSTHSLLLLTASSGS-SCYGDTDSEESTGPRA 299

  Fly   451 AEADLKCLRKANGAPII 467
            ...|    .|.:|.||:
Zfish   300 CSTD----PKHSGEPIL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 30/74 (41%)
lyl1XP_068077959.2 None

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