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Protein Alignment twi and twist2
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001096679.1 |
Gene: | twist2 / 100125350 |
XenbaseID: | XB-GENE-5878700 |
Length: | 162 |
Species: | Xenopus tropicalis |
Alignment Length: | 182 |
Identity: | 71/182 - (39%) |
Similarity: | 88/182 - (48%) |
Gaps: | 57/182 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 323 DGSAGSLLDGSDAGG----KAFRK-----------------PRRRLKRKPSKTEETDEFSNQRVM 366
|...||::...:... ||.|| |.:|.||.| ..|..::...||::
Frog 9 DSPEGSMVTSEEEADRQQRKAIRKRTILVGKPSEGRVPLSPPCKRNKRSP-HIETFEDVHTQRII 72
Fly 367 ANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQ 431
||||||||||||||||..|::|||||||||||||||||||:||||||.::|.|.::.
Frog 73 ANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLASRYIDFLYQVLQSDELD-------- 129
Fly 432 GSPSAYGSASSLLSAAANGAEADLKCLRKANGAPIIPPEKLSYLFGVWRMEG 483
.|......:..|:|||.|.||||||
Frog 130 ---------------------------HKIASCNYLAHERLSYAFSVWRMEG 154
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
42/49 (86%) |
twist2 | NP_001096679.1 |
bHLH_SF |
61..134 |
CDD:381792 |
48/107 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
91 |
1.000 |
Domainoid score |
I7592 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H101975 |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001055 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48529 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1477 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.000 |
|
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