DRSC/TRiP Functional Genomics Resources

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Protein Alignment twi and hand2

DIOPT Version :10

Sequence 1:NP_523816.2 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001093695.1 Gene:hand2 / 100101704 XenbaseID:XB-GENE-481426 Length:210 Species:Xenopus tropicalis


Alignment Length:170 Identity:55/170 - (32%)
Similarity:81/170 - (47%) Gaps:56/170 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 AQMHFQNAYRQSFEGYEPAN-SLNGSAYSSSDRDDMEYARHNALSSVSDLNGGVMSPACLADDGS 325
            ::.|.:|.|   |.|:..:: .::...||.:.....|||                       :|:
 Frog    29 SRCHEENPY---FHGWLISHPEMSPPDYSMAPSYSPEYA-----------------------NGA 67

  Fly   326 AGSLLD--------GSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAF 382
            ||  ||        ||.|||         |.::|.|         :|..||.:||:||||:|.||
 Frog    68 AG--LDHSHYGGVPGSGAGG---------LMQRPVK---------RRGTANRKERRRTQSINSAF 112

  Fly   383 KSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 421
            ..|::.||.:|:| |||||:||:|||.||.:|..:|:..|
 Frog   113 AELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twiNP_523816.2 bHLH_TS_TWIST 363..421 CDD:381470 31/58 (53%)
hand2NP_001093695.1 bHLH_TS_HAND2 93..154 CDD:381477 32/60 (53%)

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