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Protein Alignment twi and scxa
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001076538.2 |
Gene: | scxa / 100034489 |
ZFINID: | ZDB-GENE-060503-414 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 147 |
Identity: | 50/147 - (34%) |
Similarity: | 67/147 - (45%) |
Gaps: | 33/147 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 320 LADDGSAGSLLDGS-------DAGGKAFRKPRRRLKRKPS-----------KTEETDEFSN---- 362
:::|...||...|| |..|...:..| |||.| .|..|....:
Zfish 22 MSEDDENGSESSGSDDRSFHLDTSGYDLKVGR---KRKSSVGGGGRLIGVTPTIPTGTIGHVPEI 83
Fly 363 -QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSDISLL 425
||..||.|||.||.|:|.||.:|:.:|||.|:| |||||:||:||:.||..| .::.|:
Zfish 84 RQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHL------GNVLLV 142
Fly 426 KALEAQGSPSAYGSASS 442
......|.|...|..|:
Zfish 143 GEACGDGQPCHSGGPST 159
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
30/50 (60%) |
scxa | NP_001076538.2 |
HLH |
85..136 |
CDD:278439 |
30/50 (60%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170583756 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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