powered by:
Protein Alignment twi and si:ch211-246m6.4
DIOPT Version :9
Sequence 1: | NP_001033967.1 |
Gene: | twi / 37655 |
FlyBaseID: | FBgn0003900 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001340709.1 |
Gene: | si:ch211-246m6.4 / 100000527 |
ZFINID: | ZDB-GENE-050208-498 |
Length: | 193 |
Species: | Danio rerio |
Alignment Length: | 171 |
Identity: | 56/171 - (32%) |
Similarity: | 74/171 - (43%) |
Gaps: | 35/171 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 248 SQQLQQQQPHQQSHAQMHFQNAYRQSFEGYEPANSLNGSAYSSSDRDDMEYARHNALSSVSDLNG 312
||.|:...|....||.......: |...|:..:.:....||.||:
Zfish 3 SQLLRHGLPTTTLHAMKSSTGEH-----GLAHAHPAHDTQSLPSDPDDL---------------- 46
Fly 313 GVMSPACLADDGSAGSLLDGSDAGGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQS 377
|.||..| :.|...|...|..|...:|:.|: .....|.||..||.|||.||.|
Zfish 47 ---------DSGSDSS--EKSTGAGSPTRGHREVRRRRGSR--RLAGVSKQRQAANARERDRTHS 98
Fly 378 LNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRML 417
:|.||.||:.:|||.|:| |||||:||:||:.||..|..:|
Zfish 99 VNTAFTSLRTLIPTEPADRKLSKIETLRLASSYISHLANVL 139
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
twi | NP_001033967.1 |
HLH |
363..413 |
CDD:278439 |
31/50 (62%) |
si:ch211-246m6.4 | XP_001340709.1 |
HLH |
84..135 |
CDD:278439 |
31/50 (62%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170583782 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
Return to query results.
Submit another query.