DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and Sp6

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_112460.1 Gene:Sp6 / 83395 MGIID:1932575 Length:376 Species:Mus musculus


Alignment Length:369 Identity:99/369 - (26%)
Similarity:146/369 - (39%) Gaps:54/369 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGSDPLSAKEAEGPPVQVEPVDLSLRSPRASTSHGSSSSSYKFSSANKAVGYSNGKPGGSSGSSS 71
            |||....|..|..|.:.::|:                 .:|:..::.:|..|.:....|...|..
Mouse     9 LGSQHTDAPHASPPRLDLQPL-----------------QTYQGHTSPEAGDYPSPLQPGELQSLP 56

  Fly    72 SSGFGAGSAGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFA--ASPFFFTYRRISGSGSGNGT-- 132
            .......|.|....||.:....:.|.:.|.::..|||....  .|..:.::.|.:..|:.:|:  
Mouse    57 LGPEVDFSQGYELPGASSRVTCEDLESDSPLAPGPFSKLLQPDMSHHYESWFRPTHPGTEDGSWW 121

  Fly   133 ----GSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKF-----AGGDG 188
                |:..:.......:.     :|.|..|:...::..|.....|.:...:|:..     |||..
Mouse   122 DLHPGTSWMDLPHTQGAL-----TSPGHPGALQPALGGYVGDHQLCAPPPHPHPHHLLPAAGGQH 181

  Fly   189 QASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKDNSSFSGINFGGGG 253
            ...   .|.|..:...|:..|....|     |..||..|.  |..|...|....:..........
Mouse   182 LLG---PPDGAKALEAAAQESQGLDS-----SLDAASRPK--GSRRSVPRSSGQTVCRCPNCLEA 236

  Fly   254 SAFGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCI 318
            ...|.....|    ||     |.:.:|.|...||.|.|.|:||||||.|.|:|::|:||.|..|.
Mouse   237 ERLGAPCGPD----GG-----KKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCG 292

  Fly   319 WRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            .||.|||||.||.:.|||.|.|.|.:|:|.|.|||||:.||:.|
Mouse   293 KRFTRSDELQRHLQTHTGTKKFPCAVCSRVFMRSDHLAKHMKTH 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 40/78 (51%)
C2H2 Zn finger 282..304 CDD:275368 13/21 (62%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
Sp6NP_112460.1 SP6_N 1..255 CDD:411693 52/286 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 14/77 (18%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:Q3SY56 118..126 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..224 16/69 (23%)
C2H2 Zn finger 259..278 CDD:275368 12/18 (67%)
COG5048 <261..>336 CDD:227381 43/74 (58%)
C2H2 Zn finger 286..308 CDD:275368 12/21 (57%)
C2H2 Zn finger 316..336 CDD:275368 11/19 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 334..376 1/3 (33%)

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