DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42741 and Sp5

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_071880.1 Gene:Sp5 / 64406 MGIID:1927715 Length:398 Species:Mus musculus


Alignment Length:435 Identity:89/435 - (20%)
Similarity:133/435 - (30%) Gaps:128/435 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 IVQSPQSSQAILDAKQHSISYTLS-RNQAVIVEYKEDPDTDMFQVGRSSESPIDFVVMDTLPGDK 129
            |.|||:.|.......|......|| .||...:..:..|||..........||:..:   |...:.
Mouse   400 IPQSPRHSSRSPSPTQKVQEPPLSPSNQLRNLPARIPPDTLKTTARSLQSSPVPHI---TYTSNM 461

  Fly   130 KDAKIVQSTISRFACRILVDRADGNKARIYAAGFDSSRNIFLGEKATKWQDNVEID--------- 185
            ....|::..:||...|...:...|:|..:........||     |..:.::|.:|.         
Mouse   462 LPKPILKKNVSRPVSRATDEDIQGSKDALMQDLEQKLRN-----KVPQQRNNQKISYEERMARRL 521

  Fly   186 -GLTTNGVLIMHPKGDFCGGNADCGQ---------W-RETSVGGDVFSLRECRSAQQK-----GQ 234
             | ..|...:.|.:..|....|..|.         | |:...|||   ..|..:.|:|     ..
Mouse   522 LG-ADNAASVFHLENSFSSQPAQPGSPEDQYPGGIWSRKKRSGGD---STEASTIQEKCFAPRFI 582

  Fly   235 QIYDESNVLQ------DGTLIDLCGATLLW-------RSAEGLRHSPTKKDLEKLVDEI------ 280
            |:..:..|.:      |..::.|....:.|       |..:..:....:|.:...:.||      
Mouse   583 QVPQDVTVEEGRFCRIDFKVVGLPTPDISWYLDGKPIRPDDYHKMLVCEKSVHSFIIEIVTIHHA 647

  Fly   281 ---------NAGRPQ-------------CPVGLNTLVIPRKVS---LGDHVN---------QPYV 311
                     .||:.|             ||   .|.|:..|.|   .||.|.         .|.:
Mouse   648 GLYECIAKNRAGQSQFSLHLDVIAQEQLCP---PTFVVKMKNSHAMEGDAVRLECKVNASPSPQL 709

  Fly   312 YLNCGHVQGQHGWGQDKN-TNARRCPMCLEVGPVVTLCMGVEPAFYVDSGPPTY-AFNPCGHMAT 374
            |           |.:||. .......|.|........|:.:.|....|:|..|. |.|..| |:|
Mouse   710 Y-----------WKKDKEMLRIDHTRMSLSQDSSGKQCLVINPVMKSDAGWYTVSAINEAG-MST 762

  Fly   375 -----------EKT---VKYWANVDIPHGTNGFQSVCPFCATPLV 405
                       .||   .:...|:.|   .|.|.::   |..|||
Mouse   763 CNARLDVATRLNKTTHPARPLKNLPI---VNQFSTL---CLDPLV 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 22/119 (18%)
C2H2 Zn finger 282..304 CDD:275368 9/37 (24%)
C2H2 Zn finger 312..334 CDD:275368 4/22 (18%)
zf-H2C2_2 326..351 CDD:463886 5/25 (20%)
C2H2 Zn finger 342..362 CDD:275368 4/19 (21%)
Sp5NP_071880.1 SP1-4_N 31..>47 CDD:425404
SP5_N 106..297 CDD:412096
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..215
9aaTAD. /evidence=ECO:0000250|UniProtKB:Q6BEB4 187..195
C2H2 Zn finger 301..320 CDD:275368
COG5048 <311..384 CDD:227381
C2H2 Zn finger 328..350 CDD:275368
zf-H2C2_2 342..365 CDD:463886
C2H2 Zn finger 358..378 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.