DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and Spps

DIOPT Version :9

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster


Alignment Length:202 Identity:72/202 - (35%)
Similarity:101/202 - (50%) Gaps:22/202 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 SKFSLLSLFKNPYKFAGGDGQASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMG 233
            ||.:.::........|...||....|:...|::..:.|.:: |..:.......|..:|.:...:|
  Fly   635 SKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRSTNT-STTTITTPSQSHLNMNISVASVG 698

  Fly   234 RGATRKDNSSFSGINFGGGGSAFG--------FTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKV 290
            ..||.           ||||:|.|        ...:..:..:|..:  |..::.|.|...||.||
  Fly   699 GAATG-----------GGGGTATGEPKPRLKRVACTCPNCTDGEKH--SDKKRQHICHITGCHKV 750

  Fly   291 YTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHL 355
            |.|:|||:||.|.||||:|:||:|..|..||.|||||.||.|.|||.|.|:||.|.:.|.|||||
  Fly   751 YGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHL 815

  Fly   356 SLHMRRH 362
            |.|::.|
  Fly   816 SKHIKTH 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 43/78 (55%)
zf-C2H2 280..304 CDD:278523 14/23 (61%)
C2H2 Zn finger 282..304 CDD:275368 13/21 (62%)
zf-H2C2_2 296..>313 CDD:290200 11/16 (69%)
C2H2 Zn finger 312..334 CDD:275368 13/21 (62%)
zf-H2C2_2 326..351 CDD:290200 14/24 (58%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
SppsNP_001262902.1 COG5048 <725..827 CDD:227381 52/100 (52%)
C2H2 Zn finger 742..764 CDD:275368 13/21 (62%)
zf-H2C2_2 756..783 CDD:290200 16/26 (62%)
C2H2 Zn finger 772..794 CDD:275368 13/21 (62%)
zf-H2C2_2 786..809 CDD:290200 13/22 (59%)
zf-C2H2 800..822 CDD:278523 12/21 (57%)
C2H2 Zn finger 802..822 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000436
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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