Protein Alignment CG42741 and l(3)neo38

DIOPT Version :10

• Sequence 1: NP_611747.2
• Gene: CG42741 / 37654
• FlyBaseID: FBgn0261705
• Length: 362
• Species: Drosophila melanogaster
• Sequence 2: NP_001262485.1
• Gene: l(3)neo38 / 41423
• FlyBaseID: FBgn0265276
• Length: 455
• Species: Drosophila melanogaster
• Alignment Length: 442
• Identity: 92/442 - (20%)
• Similarity: 132/442 - (29%)
• Gaps: 189/442 - (42%)

  Fly    73 SGFGAGSAGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFAASPFFFTYRRISGSGSGNGTGSVSV 137
            |.||...:|   :..|||:...|...:.|      :|..||:       ..:.:.:..||.:...
  Fly     5 SAFGGPFSG---IHQFAAKFDAQTPGAFG------TPPAAAA-------NAAAAAAAAGTDNHVQ 53

  Fly   138 KQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGGD-------GQASRKTS 195
            :.:.|.|..:.|..:.     ||||:|| |....|:      ||....||       ..|..|
  Fly    54 RYQTNGNHFNQNVPNV-----SAANNMQ-YGQNISI------PYSQPQGDLNFLNAAAAADHK-- 104

  Fly   196 PTGGSSKP-------------LASNSSPSWKSYAGSG-----SPH-------------------- 222
               |...|             :..|.:.||::.|.:.     |.|
  Fly   105 ---GKIHPKIERDREEVLNQQILQNVNQSWQTLANTANTVDYSSHLLSATLPISIQHFLKYSETI 166

  Fly   223 ----------------------AALNP----AFGGMGRGATRKD-----------------NSSF 244
                                  .||.|    |.||...|....|                 |.:.
  Fly   167 KKESTGDVLKNGTNLASLALGGVALTPSNNGANGGHHNGLVGMDHGGHMTNMTDANGAALTNGAS 231

  Fly   245 SGINFGGGGS----AFGFTTSSDSM----ANGGYNDLS----KNRKVHK---------------- 281
            :|:|....|:    ..|..:||.|:    |:||....|    |.:|..|
  Fly   232 NGVNGNANGTVTNGGAGAVSSSGSVGTTNASGGTGTASGKKTKKKKPPKEKKPRPKPGEIRETKA 296

  Fly   282 ------------------------------------CDTEGCDKVYTKSSHLKAHKRTHTGEKPY 310
                                                ||.  |:....:..||..||.:|..::|:
  Fly   297 LDGSTLYCCPECQMAYPDRSLIEQHVISHAVERRFVCDI--CNAALKRKDHLTRHKLSHIPDRPH 359

  Fly   311 VCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            ||..  |:..|.|.::||.|...|:|.|...|..|.:.|.|.|||..|.|.|
  Fly   360 VCNI--CMKSFKRKEQLTLHIVIHSGEKKHVCIECGKGFYRKDHLRKHTRSH 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42741	NP_611747.2	COG5048	<273..>352	CDD:227381	27/134 (20%)
		C2H2 Zn finger	282..304	CDD:275368	7/21 (33%)
		C2H2 Zn finger	312..334	CDD:275368	7/21 (33%)
		zf-H2C2_2	326..351	CDD:463886	9/24 (38%)
		C2H2 Zn finger	342..362	CDD:275368	9/19 (47%)
l(3)neo38	NP_001262485.1	C2H2 Zn finger	305..325	CDD:275368	0/19 (0%)
		C2H2 Zn finger	333..353	CDD:275368	7/21 (33%)
		COG5048	341..>455	CDD:227381	27/71 (38%)
		C2H2 Zn finger	361..381	CDD:275368	7/21 (33%)
		C2H2 Zn finger	389..409	CDD:275368	9/19 (47%)