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Protein Alignment CG42741 and sp9

DIOPT Version :10

Sequence 1:	NP_611747.2	Gene:	CG42741 / 37654	FlyBaseID:	FBgn0261705	Length:	362	Species:	Drosophila melanogaster
Sequence 2:	NP_998125.2	Gene:	sp9 / 405896	ZFINID:	ZDB-GENE-040426-2313	Length:	447	Species:	Danio rerio

Alignment Length:	406	Identity:	109/406 - (26%)
Similarity:	155/406 - (38%)	Gaps:	111/406 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 YSNGKPGGSSGSSSSSGFGAGSAGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFAASPFFFTYRR 122
            ||..|....|.:.....|     |::.|...|| ...::..:|.::.||.|..|:... |..::|
Zfish     3 YSLVKSTNFSSTQEEPRF-----GTTPLAMLAA-TCNKIGNTSPLTTLPDSSAFSKGG-FHPWKR 60

  Fly   123 ISGS---GSGNGTGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKFA 184
            .|.|   ||.....:|:..:..:..:.:...|:|:....|.:.:...:.:::|  |||.|....:
Zfish    61 SSSSCNLGSSLPGFTVATSRSTSGLTTTTGAGNSAFCLASTSPTSSAFSAEYS--SLFSNTTSVS 123

  Fly   185 GGDGQASRKTS----------PTGGSSKPLAS---------------NSSPSW------------ 212
            ..|...|...|          |..|.:.|..|               |.:.:|
Zfish   124 SQDSGQSAFISKVHSSADTLYPRVGMAHPYESWYKSGFHSTISGDVANGASTWWDVHTNPGSWLE 188

  Fly   213 --------KSYAGSGSPHA------ALNPAFGGMGRGA--------------------------- 236
                    :|...||:|.|      ..||.|..:...|
Zfish   189 VQNPAGTLQSSLHSGTPQAIHSQLSGYNPDFSSLTHSAFSSTGISPTASHLLSTSQHLLTQEGFK 253

  Fly   237 ----TRKDNSSFSGINFGGGGSAFGFTTSSDSMANG---------------GYNDLSKNRK-VHK 281
                |..|.|:.:.: ..|..|..|.::.|....:|               |....|..|| :|.
Zfish   254 TVIPTYTDASATNAM-ISGASSGIGTSSRSSRRYSGRATCDCPNCQEAERLGPAGASLRRKGLHS 317

  Fly   282 CDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCT 346
            |...||.|||.|:||||||.|.||||:|:||.|..|..||.|||||.||.|.|||.|.|.|.:|.
Zfish   318 CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCN 382

  Fly   347 RSFSRSDHLSLHMRRH 362
            :.|.||||||.|::.|
Zfish   383 KRFMRSDHLSKHIKTH 398

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.