DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and sp5a

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_851304.2 Gene:sp5a / 353154 ZFINID:ZDB-GENE-030430-2 Length:368 Species:Danio rerio


Alignment Length:92 Identity:49/92 - (53%)
Similarity:59/92 - (64%) Gaps:0/92 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 NDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHT 335
            :|....:|.|.|...||.|||.|:||||||.|.|:||:|:||.|..|...|.|||||.||.|.||
Zfish   254 SDEPGKKKQHICHIPGCGKVYGKTSHLKAHLRWHSGERPFVCNWLFCGKSFTRSDELQRHLRTHT 318

  Fly   336 GVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            |.|.|.|..|.:.|.|||||:.|::.|
Zfish   319 GEKRFVCPDCCKRFMRSDHLAKHVKTH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 41/78 (53%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 9/19 (47%)
sp5aNP_851304.2 SP1-4_N 23..>44 CDD:425404
SP5_N 102..264 CDD:412096 2/9 (22%)
C2H2 Zn finger 268..287 CDD:275368 13/18 (72%)
zf-C2H2 293..317 CDD:395048 13/23 (57%)
C2H2 Zn finger 295..317 CDD:275368 12/21 (57%)
zf-H2C2_2 309..332 CDD:463886 12/22 (55%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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