DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and zf30C

DIOPT Version :9

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:112 Identity:32/112 - (28%)
Similarity:50/112 - (44%) Gaps:9/112 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 FGFTTSSDSMANGGYNDLSKNRKVHKCDT----EGCDKVYTKSSHLKAHKRT-HTGEKPYVCTWE 315
            :|.:.....::..|.  |..:..:||.||    :.|.|.:...:..|:|.:| ||..|||.|  .
  Fly   573 YGCSVCGKHLSTAGI--LKTHMLLHKADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKC--H 633

  Fly   316 GCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            .|...:...:.|..|...|||:|.|.|..|.:.|:...:|..|.:.|
  Fly   634 LCPKEYPYRESLLTHMTVHTGIKRFLCNNCGKRFTCISNLQAHRKVH 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 27/83 (33%)
zf-C2H2 280..304 CDD:278523 9/28 (32%)
C2H2 Zn finger 282..304 CDD:275368 7/26 (27%)
zf-H2C2_2 296..>313 CDD:290200 8/17 (47%)
C2H2 Zn finger 312..334 CDD:275368 4/21 (19%)
zf-H2C2_2 326..351 CDD:290200 10/24 (42%)
C2H2 Zn finger 342..362 CDD:275368 5/19 (26%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370
COG5048 <523..>672 CDD:227381 29/102 (28%)
C2H2 Zn finger 546..566 CDD:275368
C2H2 Zn finger 575..595 CDD:275368 2/21 (10%)
C2H2 Zn finger 603..624 CDD:275368 5/20 (25%)
C2H2 Zn finger 632..652 CDD:275368 4/21 (19%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BRQ6
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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