DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and sp8b

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_005158015.1 Gene:sp8b / 324931 ZFINID:ZDB-GENE-030131-3654 Length:455 Species:Danio rerio


Alignment Length:428 Identity:122/428 - (28%)
Similarity:169/428 - (39%) Gaps:114/428 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGSDPLSAKEAE----GPPVQVEPVDLS-------------LRSPRASTSHGSSSSSYKFSSANK 54
            |||.||:...|.    |.| ...|..:|             .|:..:|.|.|||.||:..:....
Zfish    12 LGSTPLAMLAATCNKIGSP-SPSPSSISDNSSSFGKGFHPWKRATASSCSLGSSLSSFTRNGGGL 75

  Fly    55 AVGYSNGKPGGSSGSSSSSGFGAGSAGSSSLGAF-----------------------AAQQQQQL 96
            :..:......|||..|.:||..:.|...:....|                       :....|.:
Zfish    76 SDSFGTNTSTGSSAFSLTSGTSSNSHFGNDYSVFQTSVSNNSQEPSHQPMFISKVHTSVDSLQSI 140

  Fly    97 YASSGVSKLPFSPFFAASPFFFTYRRISGSGSGN----GTGSVSVKQEDNNNSCSYNNGSSSGGA 157
            |....|:. |:..:|.:|........:..:|:..    |.|.:.|:   |.|..:......|||.
Zfish   141 YPRMSVAH-PYESWFKSSHPGIPTGDVGTTGASAWWDVGAGWIDVQ---NPNGAALQTSLHSGGL 201

  Fly   158 GSAANS-MQDYESKFSLLSLFKNPYKFAGGDGQASRKTSP----TG----GSSKPLAS---NSSP 210
            .::.:| :..|.|.:|.||           ....|...||    ||    ...||:.|   :|||
Zfish   202 QTSLHSPLGGYNSDYSSLS-----------HSAFSTSASPHLLTTGQHLMDGFKPVLSSYPDSSP 255

  Fly   211 SWKSYAG----SGSPHAALNPAFGGMGRGATRKDNSSFSG------------INFGGGGSAFGFT 259
            |....||    :|.|.|:|    .|..|.:.|:    :||            ...|..|::.   
Zfish   256 SPLGGAGGSMLTGGPTASL----AGSPRSSARR----YSGRATCDCPNCQEAERLGPAGASL--- 309

  Fly   260 TSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARS 324
                           :.:.:|.|...||.|||.|:||||||.|.||||:|:||.|..|..||.||
Zfish   310 ---------------RRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRS 359

  Fly   325 DELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            |||.||.|.|||.|.|.|.:|.:.|.||||||.|::.|
Zfish   360 DELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 42/78 (54%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
C2H2 Zn finger 312..334 CDD:275368 13/21 (62%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 10/19 (53%)
sp8bXP_005158015.1 SP8_N 19..316 CDD:411690 67/338 (20%)
C2H2 Zn finger 320..339 CDD:275368 13/18 (72%)
zf-H2C2_2 331..358 CDD:463886 17/26 (65%)
C2H2 Zn finger 347..369 CDD:275368 13/21 (62%)
zf-H2C2_2 361..384 CDD:463886 12/22 (55%)
zf-C2H2 375..397 CDD:395048 11/21 (52%)
C2H2 Zn finger 377..397 CDD:275368 10/19 (53%)

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