DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42741 and sp5l

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_919352.1 Gene:sp5l / 324261 ZFINID:ZDB-GENE-030131-2981 Length:357 Species:Danio rerio


Alignment Length:387 Identity:107/387 - (27%)
Similarity:148/387 - (38%) Gaps:130/387 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RSPRASTSHGSSSSSYKFSSANKAVGYSNGKPGGSSGSSSSSGFGAGS---AGSSSLGA------ 87
            |:|.:|...|.::.|:..::.::|....:..|......|:||.|...|   |.:|||.|      
Zfish    20 RTPSSSPESGPNTLSFLATTCSQAWQEGSQLPYEGPVGSASSMFQLWSNDVAPNSSLSAHQMTFT 84

  Fly    88 -----FAAQQQQQLYASS--------GVSKLPFSP--------FFAASPFFFTYRRISGSGSGNG 131
                 |.:..|..|.:.|        ...:||.:|        .|..||                
Zfish    85 VPKMQFPSHMQPTLGSHSHHHHHHHHHHHELPLTPPAEPPSAYSFELSP---------------- 133

  Fly   132 TGSVSVKQEDN------NNSCSYNNGS----SSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGG 186
                 ||.:.|      :|:.|.|..|    .||.|......::|.:..:||             
Zfish   134 -----VKMQGNAPYYTQHNAVSQNFPSFLQNPSGRAHLPGGHVEDGQQWWSL------------- 180

  Fly   187 DGQASRKTSPTGGSSKPLASNSSPSWKSYA-------GSGSPHAALNPAFGGMGRG---ATRK-- 239
                     |.|        ||:||...::       |.....|||   ..|..:|   :||:  
Zfish   181 ---------PQG--------NSAPSGHPFSLGRQLVLGHQPQIAAL---LQGTSKGLLSSTRRCR 225

  Fly   240 ----DNSSFSGINFGGGGSAFGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAH 300
                .|..    :.|.||:|..|                ..:::|.|....|.|||.|:||||||
Zfish   226 RCKCPNCQ----STGNGGAALEF----------------GKKRLHICHIPDCGKVYKKTSHLKAH 270

  Fly   301 KRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            .|.|.||:|::|.|..|...|.|||||.||.|.|||.|.|.||.|.:.|.||||||.|::.|
Zfish   271 LRWHAGERPFICNWLFCGKSFTRSDELQRHLRTHTGEKRFGCQQCGKRFMRSDHLSKHVKTH 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 39/78 (50%)
C2H2 Zn finger 282..304 CDD:275368 13/21 (62%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 14/24 (58%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
sp5lNP_919352.1 SP5_N 114..251 CDD:412096 39/210 (19%)
C2H2 Zn finger 255..274 CDD:275368 12/18 (67%)
zf-C2H2 280..304 CDD:395048 12/23 (52%)
C2H2 Zn finger 282..304 CDD:275368 12/21 (57%)
zf-H2C2_2 296..319 CDD:463886 13/22 (59%)
C2H2 Zn finger 312..332 CDD:275368 11/19 (58%)
zf-C2H2 312..332 CDD:395048 11/19 (58%)

Return to query results.
Submit another query.