DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and Sp8

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus


Alignment Length:477 Identity:136/477 - (28%)
Similarity:178/477 - (37%) Gaps:153/477 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGSDPLSAKEAE----GPPVQVEPVDLSLRS----------PRASTSH-------GSSSSSYKFS 50
            |||.||:...|.    |.| ...|..||..|          .|:|:|.       |||.||:..|
Mouse    12 LGSTPLAMLAATCNKIGSP-SPSPSSLSDSSSSFGKGFHPWKRSSSSSSGSCNVVGSSLSSFGVS 75

  Fly    51 SANKAVGYSNGKP-------------------GGSSGSS--------------------SSSGF- 75
            .|::..|.|:...                   |||.|||                    |||.| 
Mouse    76 GASRNGGSSSAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSSSAAAAAAAAAAAASSSPFA 140

  Fly    76 -------------GAGSAGSSSLGAFAAQQQQQLYASSGVSKL------------------PFSP 109
                         |:|..|....|...|..|...:....:||:                  |:..
Mouse   141 NDYSVFQAPGVSGGSGGGGGGGGGGSGAHSQDSSHQPVFISKVHTSVDGLQGIYPRVGMAHPYES 205

  Fly   110 FFAAS-PFFFTYRRISGSGSGN----GTGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQD--- 166
            :|..| |.......:..:|:.:    |.|.:.|:   |.|..:...||....||....|:..   
Mouse   206 WFKPSHPGLGAAADVGSAGASSWWDVGAGWIDVQ---NPNGAAALPGSLHPAAGGLQTSLHSPLG 267

  Fly   167 -YESKFSLLSLFKNPYKFAGGDGQASRKTSPTG----GSSKPLASNSSP--SWKSYAGSGSPHAA 224
             |.|.:|.||      ..|...|.:|...||.|    ...||:...|.|  :....||:||...:
Mouse   268 GYNSDYSGLS------HSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLAGAGSSMLS 326

  Fly   225 LNPA--FGGMGRGATRKDNSSFSG------------INFGGGGSAFGFTTSSDSMANGGYNDLSK 275
            ..||  .||..|.:.|:    :||            ...|..|::.                  :
Mouse   327 AGPAAQLGGSPRSSARR----YSGRATCDCPNCQEAERLGPAGASL------------------R 369

  Fly   276 NRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPF 340
            .:.:|.|...||.|||.|:||||||.|.||||:|:||.|..|..||.|||||.||.|.|||.|.|
Mouse   370 RKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRF 434

  Fly   341 RCQLCTRSFSRSDHLSLHMRRH 362
            .|.:|.:.|.||||||.|::.|
Mouse   435 ACPVCNKRFMRSDHLSKHVKTH 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 42/78 (54%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
C2H2 Zn finger 312..334 CDD:275368 13/21 (62%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 10/19 (53%)
Sp8NP_001366308.1 SP8_N 19..375 CDD:411690 81/387 (21%)
C2H2 Zn finger 379..398 CDD:275368 13/18 (72%)
zf-H2C2_2 390..417 CDD:463886 17/26 (65%)
C2H2 Zn finger 406..428 CDD:275368 13/21 (62%)
zf-H2C2_2 420..443 CDD:463886 12/22 (55%)
zf-C2H2 434..456 CDD:395048 11/21 (52%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)

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