DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and btd

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:350 Identity:105/350 - (30%)
Similarity:153/350 - (43%) Gaps:87/350 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 QQQQQLYASSGVSKLPFSPFFAASPFFFTYRRISGSGSGNGTGS------VSVKQEDNNNSCSYN 149
            |||||........:.....|.:|:........:|||.||:.:||      ..:|.|     ..|.
  Fly    73 QQQQQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLE-----LPYP 132

  Fly   150 NGSSSGGAGSAANSMQDYESKFSLL-SLFKNP-YKFAGGDGQASRKTS----PTGGSSKPLA--- 205
            ..||:|.| |..:|:|...|..|:. |:|.:| ..||......|..|:    ||..::..||   
  Fly   133 QASSTGTA-SPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSP 196

  Fly   206 SNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKD----NSSFSGINFGGG------------GS 254
            ::|||| .|.|.:.:..||...|...:|..|....    |:::||:.....            |:
  Fly   197 TSSSPS-SSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYSGLGPARSQFPYAQYASDYYGN 260

  Fly   255 AFGFTTSS-------------DSMANGGYN--DLS------------------------------ 274
            |.|.::|:             .|.:..|:|  |::                              
  Fly   261 AVGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSGLPPIVGP 325

  Fly   275 --KNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGV 337
              :.||.|.|...||:::|.|:||||.|.|.||||:|::|.  .|..||:|||||.||.|.||..
  Fly   326 DERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLCL--TCGKRFSRSDELQRHGRTHTNY 388

  Fly   338 KPFRCQLCTRSFSRSDHLSLHMRRH 362
            :|:.|.:|::.||||||||.|.:.|
  Fly   389 RPYACPICSKKFSRSDHLSKHKKTH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 38/110 (35%)
C2H2 Zn finger 282..304 CDD:275368 11/21 (52%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 11/24 (46%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 10/18 (56%)
zf-H2C2_2 349..374 CDD:463886 14/26 (54%)
C2H2 Zn finger 365..385 CDD:275368 12/21 (57%)
zf-H2C2_2 377..402 CDD:463886 11/24 (46%)
zf-C2H2 391..413 CDD:395048 11/21 (52%)
C2H2 Zn finger 393..413 CDD:275368 11/19 (58%)

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