DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and btd

DIOPT Version :9

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:350 Identity:105/350 - (30%)
Similarity:153/350 - (43%) Gaps:87/350 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 QQQQQLYASSGVSKLPFSPFFAASPFFFTYRRISGSGSGNGTGS------VSVKQEDNNNSCSYN 149
            |||||........:.....|.:|:........:|||.||:.:||      ..:|.|     ..|.
  Fly    73 QQQQQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLE-----LPYP 132

  Fly   150 NGSSSGGAGSAANSMQDYESKFSLL-SLFKNP-YKFAGGDGQASRKTS----PTGGSSKPLA--- 205
            ..||:|.| |..:|:|...|..|:. |:|.:| ..||......|..|:    ||..::..||   
  Fly   133 QASSTGTA-SPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSP 196

  Fly   206 SNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKD----NSSFSGINFGGG------------GS 254
            ::|||| .|.|.:.:..||...|...:|..|....    |:::||:.....            |:
  Fly   197 TSSSPS-SSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYSGLGPARSQFPYAQYASDYYGN 260

  Fly   255 AFGFTTSS-------------DSMANGGYN--DLS------------------------------ 274
            |.|.::|:             .|.:..|:|  |::                              
  Fly   261 AVGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSGLPPIVGP 325

  Fly   275 --KNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGV 337
              :.||.|.|...||:::|.|:||||.|.|.||||:|::|.  .|..||:|||||.||.|.||..
  Fly   326 DERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLCL--TCGKRFSRSDELQRHGRTHTNY 388

  Fly   338 KPFRCQLCTRSFSRSDHLSLHMRRH 362
            :|:.|.:|::.||||||||.|.:.|
  Fly   389 RPYACPICSKKFSRSDHLSKHKKTH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 38/110 (35%)
zf-C2H2 280..304 CDD:278523 12/23 (52%)
C2H2 Zn finger 282..304 CDD:275368 11/21 (52%)
zf-H2C2_2 296..>313 CDD:290200 10/16 (63%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:290200 11/24 (46%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 10/18 (56%)
zf-H2C2_2 349..374 CDD:290200 14/26 (54%)
C2H2 Zn finger 365..385 CDD:275368 12/21 (57%)
zf-H2C2_2 377..402 CDD:290200 11/24 (46%)
zf-C2H2 391..413 CDD:278523 11/21 (52%)
C2H2 Zn finger 393..413 CDD:275368 11/19 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455422
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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