DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and Klf17

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001418087.1 Gene:Klf17 / 298449 RGDID:1307711 Length:383 Species:Rattus norvegicus


Alignment Length:349 Identity:98/349 - (28%)
Similarity:128/349 - (36%) Gaps:93/349 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GSSSSSGFGAGSAGS---SSLGAFAAQQQQQLYASSG-----VSKLPFSPFFAASPFFFT----- 119
            |||.:|||....|..   ..:..:.|..::...:..|     :..||.|.....|....|     
  Rat    28 GSSGNSGFHQPPAPQYLPELMRPYMASAEEFRCSEGGWEPQFIRSLPESGARCPSQLIPTPSQNY 92

  Fly   120 YRRISGSGS-----GN-GTGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFK 178
            .:|..|.||     || ||..|::...:|.        .|.||..|.|:.               
  Rat    93 CQRSIGRGSHVMPVGNPGTLGVAISFSENL--------MSQGGLSSPASC--------------- 134

  Fly   179 NPYKFAGGDGQASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRK---- 239
                   |....:...:||      :..:.||:..:..||..|...|.|   ||....|..    
  Rat   135 -------GVSVMTHSNAPT------MPYSVSPTVPATTGSLKPGIFLVP---GMPSAETHAVTPY 183

  Fly   240 DNSSFSGINFGGGGSAF----------GFTTSSD---------------------SMANGGYNDL 273
            .|.....:|.....:.|          ...|.|:                     |.:.|.....
  Rat   184 MNQMLHSVNPEMVSARFQQLLPIDSQDSLATQSNVQEGPFMCEQPTPAPQERETASTSRGATRRR 248

  Fly   274 SKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVK 338
            |...:.:.|..:.|.|.|||.|||.:|.|.|||||||:|.|:||.|||.|||||.||.|.||..:
  Rat   249 SLVLRPYVCSYDDCGKAYTKRSHLVSHLRKHTGEKPYICDWKGCKWRFFRSDELGRHKRIHTRYR 313

  Fly   339 PFRCQLCTRSFSRSDHLSLHMRRH 362
            |.:|..|.|.|.|||||..|.|.|
  Rat   314 PHKCDECNREFMRSDHLRQHKRTH 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 41/78 (53%)
C2H2 Zn finger 282..304 CDD:275368 11/21 (52%)
C2H2 Zn finger 312..334 CDD:275368 15/21 (71%)
zf-H2C2_2 326..351 CDD:463886 12/24 (50%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
Klf17NP_001418087.1 KLF17_N 1..259 CDD:410567 51/269 (19%)
zf-C2H2 255..279 CDD:395048 11/23 (48%)
C2H2 Zn finger 260..279 CDD:275368 10/18 (56%)
C2H2 Zn finger 287..309 CDD:275368 15/21 (71%)
zf-H2C2_2 304..324 CDD:463886 9/19 (47%)
zf-C2H2 315..337 CDD:395048 11/21 (52%)
C2H2 Zn finger 317..337 CDD:275368 11/19 (58%)

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