DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and Sp5

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001100022.1 Gene:Sp5 / 296510 RGDID:1308499 Length:398 Species:Rattus norvegicus


Alignment Length:426 Identity:107/426 - (25%)
Similarity:151/426 - (35%) Gaps:161/426 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RSPRASTSHGSSSSSYKFSSANKAVGYSNGKPGGSS-------------GSSS------SSGFGA 77
            |:|.||...|..|.....::....:    |:||.::             ||.|      ::...|
  Rat    19 RTPSASPDLGKHSPLALLAATCSRI----GQPGAAAAPDFLQVPYDPALGSPSRLFHPWTADMPA 79

  Fly    78 GSAGS-----SSLG----------AFAAQQQQQL---------YASSGVSKLPFS---------- 108
            .|.|:     .|||          :|.|..:..|         |..|.|..||.|          
  Rat    80 HSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAP 144

  Fly   109 ---PFFAAS---PFFF-------------TYRRISGS------------GSGNGTGSVSVKQEDN 142
               |:.|.:   |.:.             |.|::|.:            .||.|.||..|.....
  Rat   145 AYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSPAPAPDDLPWWSIPQSGAGPGSSGVPGTSL 209

  Fly   143 NNSCSYNNG--------SSSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGGDGQAS---RKTSP 196
            :::|:   |        :|:..|.:||.::|        ..|...|..||....|.:   :..:|
  Rat   210 SSACA---GPPHAPRFPASAAAAAAAAAALQ--------RGLVLGPSDFAQYQSQIAALLQTKAP 263

  Fly   197 TGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKDNSSFSGINFGGGGSAFGFTTS 261
            ...:::.......|:.:  |..|:|.|  .|.                                 
  Rat   264 LAATARRCRRCRCPNCQ--AAGGAPEA--EPG--------------------------------- 291

  Fly   262 SDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDE 326
                          .:|.|.|...||.|||.|:||||||.|.||||:|:||.|..|...|.||||
  Rat   292 --------------KKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDE 342

  Fly   327 LTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            |.||.|.|||.|.|.|..|.:.|.|||||:.|::.|
  Rat   343 LQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTH 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 42/78 (54%)
C2H2 Zn finger 282..304 CDD:275368 14/21 (67%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 9/19 (47%)
Sp5NP_001100022.1 SP1-4_N 31..>47 CDD:425404 2/19 (11%)
SP5_N 106..297 CDD:412096 40/252 (16%)
C2H2 Zn finger 301..320 CDD:275368 13/18 (72%)
COG5048 <311..384 CDD:227381 40/68 (59%)
C2H2 Zn finger 328..350 CDD:275368 12/21 (57%)
zf-H2C2_2 342..365 CDD:463886 12/22 (55%)
C2H2 Zn finger 358..378 CDD:275368 9/19 (47%)

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