Protein Alignment CG42741 and Sp4

DIOPT Version :10

• Sequence 1: NP_611747.2
• Gene: CG42741 / 37654
• FlyBaseID: FBgn0261705
• Length: 362
• Species: Drosophila melanogaster
• Sequence 2: NP_036893.1
• Gene: Sp4 / 25162
• RGDID: 3741
• Length: 783
• Species: Rattus norvegicus
• Alignment Length: 448
• Identity: 112/448 - (25%)
• Similarity: 161/448 - (35%)
• Gaps: 127/448 - (28%)

  Fly    20 PPVQVEPVDLSLRSPRASTSHGSSSSSYKFSSANKAVGYSNGKPGGSSGSSS------------- 71
            |.....|......||.:||:..:::|:...||.........|:...:|.|||
  Rat   303 PTTSTAPASTMPESPSSSTTCTTTASTSLTSSDTLVSSADTGQYASTSASSSERTIEEPQTPAAT 367

  Fly    72 -----------SSGFGAGSAGSSSL------GAFAAQQQQ-----------------QLYASSGV 102
                       |:|.......|:||      |....||.|                 ||.:...:
  Rat   368 ESEAQSSSQLQSNGIQNAQDQSNSLQQVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTI 432

  Fly   103 SKLPFSP-----FFAASPFFFTYRRISGSGSGN-GTGSVSVKQEDNNNSCSYNNGSSSGGAGSAA 161
            ..:...|     ..|.:|.....|..:.:.||. ...:|.|:...:.::....|         |.
  Rat   433 QTIQQQPLQNVQLQAVNPTQVLIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQN---------AG 488

  Fly   162 NSMQDYESKFSLLSLFKNPYKFAGGDGQASRKTSPTGGSSKPLASN-----SSPSWKSY------ 215
            .|.|          |...|...:||...|  :.:|...:..|:..|     |.|:.::.
  Rat   489 LSQQ----------LTITPVSSSGGTTLA--QIAPVAVAGAPITLNTAQLASVPNLQTVSVANLG 541

  Fly   216 -AG---SGSPHAALNPAFGGMGRGATRKDNSSFSGINFGGGGSA------------------FGF 258
             ||   .|.|....:.|....|:...:...::.:.:....||.|                  .|.
  Rat   542 AAGVQVQGVPVTITSVAGQQQGQDGVKVQQATIAPVTVAVGGIANATIGAVSPDQLTQVHLQQGQ 606

  Fly   259 TTSSDSMANG-------------------GYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTH 304
            .||...:..|                   |.::..| :|.|.|..|||.|||.|:|||:||.|.|
  Rat   607 QTSDAEVQPGKRLRRVACSCPNCREGEGRGSSEPGK-KKQHVCHIEGCGKVYGKTSHLRAHLRWH 670

  Fly   305 TGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            |||:|::|.|..|..||.|||||.||.|.|||.|.|.|..|::.|.||||||.|::.|
  Rat   671 TGERPFICNWMFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHVKTH 728

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42741	NP_611747.2	COG5048	<273..>352	CDD:227381	43/78 (55%)
		C2H2 Zn finger	282..304	CDD:275368	14/21 (67%)
		C2H2 Zn finger	312..334	CDD:275368	13/21 (62%)
		zf-H2C2_2	326..351	CDD:463886	13/24 (54%)
		C2H2 Zn finger	342..362	CDD:275368	10/19 (53%)
Sp4	NP_036893.1	SP4_N	30..647	CDD:411773	63/365 (17%)
		zf-C2H2	646..670	CDD:395048	15/23 (65%)
		C2H2 Zn finger	648..670	CDD:275368	14/21 (67%)
		zf-C2H2	676..700	CDD:395048	13/23 (57%)
		C2H2 Zn finger	678..700	CDD:275368	13/21 (62%)
		zf-H2C2_2	692..715	CDD:463886	12/22 (55%)
		zf-C2H2	706..728	CDD:395048	11/21 (52%)
		C2H2 Zn finger	708..728	CDD:275368	10/19 (53%)