DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42741 and Klf8

DIOPT Version :9

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_006528923.2 Gene:Klf8 / 245671 MGIID:2442430 Length:457 Species:Mus musculus


Alignment Length:379 Identity:126/379 - (33%)
Similarity:147/379 - (38%) Gaps:145/379 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QVEPVDLSLRSPRASTSHGSSSSSYKFSSANKAVGYSNGKPGGSSGSSSSSGFGAGSAGSSSLGA 87
            ||||||||...|:|                                                   
Mouse   182 QVEPVDLSFHKPKA--------------------------------------------------- 195

  Fly    88 FAAQQQQQLYASSGVSKLPFSP------------FFAASPFFFTYRRISGSGSGNG--------- 131
             ..|....|.|.....|.|.:|            ..||.|...|...|..|..|.|         
Mouse   196 -PLQPASMLQAPIRPPKPPTAPQAIMVPTSADTVTSAAIPTVLTPGSILASSQGTGGQPILHVIH 259

  Fly   132 -TGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGGDGQASRKTS 195
             ..|||:                                          |.|.:|      .||.
Mouse   260 TIPSVSL------------------------------------------PNKMSG------LKTI 276

  Fly   196 PTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGR--GATRKDNSSFSGINF--------- 249
            |....|.|:...|.|:      .|||.|...|..||.|:  |:.:.|.:|...:.|         
Mouse   277 PLVVQSLPMVYTSLPT------DGSPAAITVPLIGGDGKSAGSVKVDPASMCPLEFPSDSDESAI 335

  Fly   250 GGGGSAF----GFTTSSDSMAN-GGYNDLS-KNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEK 308
            ..|.||.    ||.....:|.: .|...|. |.|::|:||..||.||||||||||||:|.|||||
Mouse   336 ESGSSALQSLQGFHHEPATMVHMQGEESLDLKRRRIHQCDFAGCSKVYTKSSHLKAHRRIHTGEK 400

  Fly   309 PYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            ||.|||:||.|:||||||||||:|||||:|||||..|.||||||||||||.|||
Mouse   401 PYKCTWDGCSWKFARSDELTRHFRKHTGIKPFRCTDCNRSFSRSDHLSLHRRRH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 59/79 (75%)
zf-C2H2 280..304 CDD:278523 18/23 (78%)
C2H2 Zn finger 282..304 CDD:275368 17/21 (81%)
zf-H2C2_2 296..>313 CDD:290200 13/16 (81%)
C2H2 Zn finger 312..334 CDD:275368 17/21 (81%)
zf-H2C2_2 326..351 CDD:290200 19/24 (79%)
C2H2 Zn finger 342..362 CDD:275368 15/19 (79%)
Klf8XP_006528923.2 KLF8_N 147..314 CDD:410607 46/237 (19%)
COG5048 370..>440 CDD:227381 52/69 (75%)
C2H2 Zn finger 374..396 CDD:275368 17/21 (81%)
C2H2 Zn finger 404..426 CDD:275368 17/21 (81%)
zf-C2H2 432..454 CDD:395048 17/21 (81%)
C2H2 Zn finger 434..454 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42933
orthoMCL 1 0.900 - - OOG6_114047
Panther 1 1.100 - - O PTHR23235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5802
SonicParanoid 1 1.000 - - X1178
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.900

Return to query results.
Submit another query.