DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and sptf-3

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_493353.3 Gene:sptf-3 / 189783 WormBaseID:WBGene00012735 Length:412 Species:Caenorhabditis elegans


Alignment Length:287 Identity:87/287 - (30%)
Similarity:120/287 - (41%) Gaps:26/287 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GAGSAGSSSLGAFAAQQQQQLYASSGVSKLPFSPFFAASPFFFTYRRISGSGSGNGTGSVSVKQE 140
            |:|..|:|: |....|||||.........:|.:|          ...:||............:|:
 Worm   136 GSGIIGNSN-GNNQQQQQQQQQQQQRRDPIPIAP----------AGMVSGQRMQQQQQQPQQQQQ 189

  Fly   141 DNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGGDGQASRKTSPTGGSSKPLA 205
            .|||    |.|:|:...|..|..:.........::|....::....|.|....|:    ...|:|
 Worm   190 HNNN----NTGASTSNGGVNAAPVMPVMGGQQRITLGNLHFQQDPNDPQKWIITN----EGPPVA 246

  Fly   206 SNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKDNSSFSGINFGGGGSAFGFTTSSDSMANGGY 270
            ..|:|:.|.   :...|..:.|.....|......|....:|...|........|..:....|...
 Worm   247 GPSAPARKP---NQIQHRQMIPQMNEDGMMNMGNDYGDINGQGLGEAPKRCACTCPNCLQQNNRQ 308

  Fly   271 NDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHT 335
            .| .|:| :|.|..  |:|.|.|:|||:||.|.|.|.||:.|.|:.|..:|.|||||.||.|.||
 Worm   309 GD-GKSR-IHICHL--CNKTYGKTSHLRAHLRGHAGNKPFACDWQHCNKKFTRSDELQRHRRTHT 369

  Fly   336 GVKPFRCQLCTRSFSRSDHLSLHMRRH 362
            |.|.|.|..|.:.|.|||||:.|.|.|
 Worm   370 GEKRFACNHCGKKFMRSDHLTKHERTH 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 38/78 (49%)
C2H2 Zn finger 282..304 CDD:275368 11/21 (52%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 13/24 (54%)
C2H2 Zn finger 342..362 CDD:275368 10/19 (53%)
sptf-3NP_493353.3 COG5048 <311..406 CDD:227381 46/89 (52%)
C2H2 Zn finger 318..338 CDD:275368 11/21 (52%)
C2H2 Zn finger 346..368 CDD:275368 12/21 (57%)
zf-H2C2_2 360..383 CDD:463886 12/22 (55%)
C2H2 Zn finger 376..396 CDD:275368 10/19 (53%)

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