DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and sptf-2

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_495833.1 Gene:sptf-2 / 188733 WormBaseID:WBGene00011926 Length:166 Species:Caenorhabditis elegans


Alignment Length:195 Identity:63/195 - (32%)
Similarity:85/195 - (43%) Gaps:62/195 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 DGQASRKTSPTGGSSKPLASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKDNSSFSGINFGG 251
            ||.|::...|               |:|:   ||.|.:| |:.......|:              
 Worm     2 DGAATKFFRP---------------WESH---GSYHHSL-PSISPPDSPAS-------------- 33

  Fly   252 GGSAFGFTTSSDSMANGGYNDLSKNRK----------------------VHKCDTEGCDKVYTKS 294
                   |::|.|.::.|.|:|:..|:                      .|.|...||.|.|.|:
 Worm    34 -------TSASSSSSSIGANELTTKRRKCERCTCPNCKAIKHGDRGSQHTHLCSVPGCGKTYKKT 91

  Fly   295 SHLKAHKRTHTGEKPYVCTWEGCIWRFARSDELTRHYRKHTGVKPFRCQLCTRSFSRSDHLSLHM 359
            |||:||.|.|||::|:||.|..|..||.|||:|.||.|.||....|.|:.|.|.|||||||..|:
 Worm    92 SHLRAHLRKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFCIRQFSRSDHLQQHL 156

  Fly   360  359
             Worm   157  156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 40/100 (40%)
C2H2 Zn finger 282..304 CDD:275368 12/21 (57%)
C2H2 Zn finger 312..334 CDD:275368 12/21 (57%)
zf-H2C2_2 326..351 CDD:463886 11/24 (46%)
C2H2 Zn finger 342..362 CDD:275368 11/18 (61%)
sptf-2NP_495833.1 zf-C2H2_8 79..156 CDD:464935 42/76 (55%)
C2H2 Zn finger 82..101 CDD:275368 11/18 (61%)
C2H2 Zn finger 109..131 CDD:275368 12/21 (57%)
C2H2 Zn finger 139..156 CDD:275368 10/16 (63%)

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