DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42741 and sptf-1

DIOPT Version :10

Sequence 1:NP_611747.2 Gene:CG42741 / 37654 FlyBaseID:FBgn0261705 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001021465.1 Gene:sptf-1 / 172909 WormBaseID:WBGene00009743 Length:298 Species:Caenorhabditis elegans


Alignment Length:192 Identity:57/192 - (29%)
Similarity:75/192 - (39%) Gaps:42/192 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 TGSVSVKQEDNNNSCSYNNGSSSGGAGSAANSMQDYESKFSLLSLFKNPYKFAGGDGQASRKTSP 196
            |.:.||....|..:.|...|..|....:.|:.:....:..|.|::.......|    ::.:.|.|
 Worm   124 TTASSVDVYQNYLASSQLGGLLSSSVSAVASQLPAGINAQSALNITSQQRTIA----KSFQHTKP 184

  Fly   197 TGGSSK-P---LASNSSPSWKSYAGSGSPHAALNPAFGGMGRGATRKDNSSFSG----------- 246
            ...||. |   .|||||.:  |...|||...:   |.|..|.|.|.|..||.:.           
 Worm   185 MASSSSIPSVLTASNSSAN--SLVSSGSESVS---ARGTSGSGGTGKYPSSRTANKCECPNCHEI 244

  Fly   247 INFGGGGSAFGFTTSSDSMANGGYNDLSKNRKVHKCDTEGCDKVYTKSSHLKAHKRTHTGEK 308
            ..||....|                  ::.|.||.|...||.|||.||||||||.|.|:||:
 Worm   245 EKFGPNAIA------------------ARKRGVHNCHIAGCGKVYNKSSHLKAHLRWHSGER 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42741NP_611747.2 COG5048 <273..>352 CDD:227381 21/36 (58%)
C2H2 Zn finger 282..304 CDD:275368 15/21 (71%)
C2H2 Zn finger 312..334 CDD:275368
zf-H2C2_2 326..351 CDD:463886
C2H2 Zn finger 342..362 CDD:275368
sptf-1NP_001021465.1 SP6-9_N <162..261 CDD:425402 30/125 (24%)
zf-C2H2 260..284 CDD:395048 16/23 (70%)
C2H2 Zn finger 262..284 CDD:275370 15/21 (71%)
Blue background indicates that the domain is not in the aligned region.

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